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ProteinFeature a owl:Class extends Feature

Subclasses

ProteinHomology

ProteinStructure

BindingSite

SignalPeptide

ModifiedResidue

CrossLink

ImmunoglobulinFeature

ProteinRepeat

Chain

ConservedRegion

ProPeptide

MaturePeptide

IntraMembraneRegion

TransMembraneRegion

Annotations

subDomain SequenceFeatureCore
skos:editorialNote Some of the subclasses are based on the ontology found in the metacyc database http://bioinformatics.ai.sri.com/ptools/protein-features-ontology.html
skos:exactMatch http://purl.obolibrary.org/obo/SO_0000839

Properties

property description cardinality type
location 1:1 Location
citation Any publication associated to feature annotation 0:N Citation
function Short description of the function 0:1 xsd:string
phenotype Associated phenotypic property 0:1 xsd:string
provenance The provenance of the feature 1:N FeatureProvenance
artificialLocation Indicate that the location is artificial because of a heterogeneous population for low quality sequence region 0:1 ReasonArtificialLocation
accession The accession id of the entry referenced 0:N xsd:string
standardName The standard name of the feature 0:1 xsd:string
xref Reference to other entries holding entries with related information in other databases 0:N XRef
note A set off some additional notes 0:N Note