| sample |
Sample from which this piece of sequence originates from. |
0:1 |
Sample |
| function |
Short description of the function |
0:1 |
xsd:string |
| macronuclear |
Indicates that this sequence from the macro-nuclear DNA from an organism which undergoes chromosomal differentiation between macro-nuclear and micro-nuclear stages. |
0:1 |
xsd:Boolean |
| accession |
The accession id of the entry referenced |
0:N |
xsd:string |
| sequence |
The sequence, encoded with the default DNA or protein encoding |
1:1 |
xsd:string |
| length |
Length of the sequence |
1:1 |
xsd:Long |
| rearranged |
Indicates if the sequence has undergone somatic rearrangement as part of an adaptive immune response. If equal to false it is the un-rearranged sequence that was inherited from the parental germ line. If equal to true the sequence has undergone somatic rearrangement as part of an adaptive immune response. If not defined it is not applicable to the sequence or unknown. |
0:1 |
xsd:Boolean |
| alternativeNames |
Any alternative names of the sequence |
0:N |
xsd:string |
| organism |
The organism from which the sequence originates from |
0:1 |
Organism |
| sha384 |
The hash key of the sequence |
1:1 |
xsd:string |
| standardName |
The standard name of the feature |
0:1 |
xsd:string |
| cloneLib |
If a clone library was used for sequencing, specify the clone library |
0:1 |
xsd:string |
| shortName |
The short name of the sequence |
0:1 |
xsd:string |
| topology |
The topology of the sequence (linear, circular) |
0:1 |
Topology |
| clone |
If a clone library was used for sequencing, the sequence can originate from one or more clones |
0:N |
xsd:string |
| citation |
Any publication associated to feature annotation |
0:N |
Citation |
| expression |
Expression feature |
0:N |
Expression |
| description |
An optional short description |
0:1 |
xsd:string |
| sequenceVersion |
The version of the sequence |
0:1 |
xsd:Integer |
| xref |
Reference to other entries holding entries with related information in other databases |
0:N |
XRef |
| exonList |
This list off exons that form this transcript, in case of prokaryote it contains one element |
0:1 |
ExonList |
| translTable |
The translation table of the nucleotide sequence, if not present its inherited from the parent NASequence |
0:1 |
xsd:Integer |
| feature |
The set of features annotating the sequence |
0:N |
TranscriptFeature |
| recommendedName |
The recommended name of the sequence |
0:1 |
xsd:string |
| integratedInto |
If this NA object is integrated into another NA object, for example a phage genome which is integrated into a bacterial genome or a plasmid which is integrated into a yeast genome. |
0:1 |
NASequence |
| proviral |
Indicates that this sequence is obtained from a virus or phage that is integrated into the genome of another organism |
0:1 |
xsd:Boolean |
| commonName |
The common name of the sequence |
0:1 |
xsd:string |
| note |
A set off some additional notes |
0:N |
Note |
| assembly |
The optional assembly information of the sequence |
0:1 |
SequenceAssembly |